Scientific Articles

Scientific Articles

New snack foods nurture healthy gut microbiome.

Julia Evangelou Strait

Despite evidence of the gut microbiome’s role in human health, researchers are still working out what shapes the community of microbes.

Michael Eisenstein

Alteration in urease-producing bacteria in the gut microbiomes of patients with inflammatory bowel diseases

Ryvchin R, Dubinsky D, Rabinowitz KM, Wasserberg N, Dotan I, and Gophna U.

Commensal fungi and their cell-wall β-glucans direct differential responses in human intestinal epithelial cells.

Cohen-Kedar S, Keizer D, Schwartz S, Rabinowitz KM, Kaboub K, Shaham Barda E. Sadot E, Wolff-Bar M, Shaltiel T, Dotan I.

Carriage of Colibactin-producing Bacteria and Colorectal Cancer Risk.

Dubinsky V, Dotan I, Gophna U.

Dysbiosis in Metabolic Genes of the Gut Microbiomes of Patients with an Ileo-anal Pouch Resembles That Observed in Crohn’s Disease

V. Dubinsky, L. Reshef, K. Rabinowitz, KM. Yadgar, L. Godny, K. Zonensain, N. Wasserberg, I. Dotan, and U. Gophna.

Predominantly Antibiotic-resistant Intestinal Microbiome Persists in Patients With Pouchitis Who Respond to Antibiotic Therapy

Dubinsky V, Reshef L, Bar N, Keizer D, Golan N, Rabinowitz KM, Godny L, Yadgar K, Zonensain K, Tulchinsky H, Gophna U, Dotan I.

Adherence to the Mediterranean diet is associated with decreased fecal calprotectin in patients with ulcerative colitis after pouch surgery.

Godny L, Reshef L, Pfeffer Gik T, Goren I, Yanai H, Tulchinsky H, Gophna U, Dotan I.

Gut microbiota density influences host physiology and is shaped by host and microbial factors

Contijoch J, Britton J, Yang C, Mogno I, Li Z, Ng R, Llewellyn R, Hira S, Johnson C, Rabinowitz KM, Barkan R, Dotan I, Hirten R, Fu S, Luo Y, Yang N, Luong T, Labrias P, Lira S, Peter I, Grinspan A, Clemente J, Kosoy R, Kim-Schulze S, Qin X, Castillo A, Hurley A, Atreja A, Rogers J, Fasihuddin F, Saliaj M, Nolan A, Reyes-Mercedes P, Rodriguez C, Aly S, Santa-Cruz K,Peters L, Suárez-Fariñas M, Huang R, Hao K, Zhu J, Zhang B, Losic B, rizar H, Song W, Narzo A, Wang W, Cohen B, DiMaio C, Greenwald D, Itzkowitz S, Lucas A, Marion J, Maser E, Ungaro R, Nayagmon S, Novak J, Shah B, Ullman T, Rubin P, George J, Legnina P, Telesco S, Friedman J, Brodmerkel C, Plevy S, Cho J, Colombel J, Schadt E, Argmann C, Dubinsky M, Kasarskis A, Sands B, Faith J.

Starch consumption may modify anti-glycan antibodies and fecal fungal composition in patients with ileo-anal pouch.

Idan Goren, Lihi Godny, Leah Reshef, Henit Yanai, Uri Gophna, Hagit Tulchinsky, Iris Dotan

Fruit Consumption is Associated with Alterations in Microbial Composition and Lower Rates of Pouchitis

L Godny, N Maharshak, L Reshef, I Goren, L Yahav, N Fliss-Isakov, U Gophna, H Tulchinsky, I Dotan

Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples

Nicola Segata, Susan Kinder Haake, Peter Mannon, Katherine P Lemon, Levi Waldron, Dirk Gevers, Curtis Huttenhower & Jacques Izard

Long-Term Effects of Early-Life Antibiotic Exposure on Resistance to Subsequent Bacterial Infection

Claire Roubaud-Baudron, Victoria E. Ruiz, Alexander M. Swan, Jr., Bruce A. Vallance, Ceren Ozkul, Zhiheng Pei, Jackie Li, Thomas W. Battaglia, Guillermo I. Perez-Perez, Martin J. Blaser

Predominantly Antibiotic-resistant Intestinal Microbiome Persists in Patients With Pouchitis Who Respond to Antibiotic Therapy

Vadim Dubinsky, Leah Reshef, Nir Bar, Danielle Keizer, Noam Golan, Keren Rabinowitz, Lihi Godny, Karin Yadgar, Keren Zonensain, Hagit Tulchinsky, Uri Gophna, and Iris Dotan

The Gut Microbiota Regulates White Adipose Tissue Inflammation and Obesity Via a Family of MicroRNAs

Anthony T. Virtue, Sam J. McCright, Jasmine M. Wright, Monica T. Jimenez, Walter K. Mowel, Jonathan J. Kotzin, Leonel Joannas, Megha G. Basavappa, Sean P. Spencer, Megan L. Clark, Stephen H. Eisennagel, Adam Williams, Maayan Levy, Sasikanth Manne, Sarah E. Henrickson, E. John Wherry, Christoph A. Thaiss, Eran Elinav, Jorge Henao-Mejia

The Pros, Cons, and Many Unknowns of Probiotics

Jotham Suez, Niv Zmora, Eran Segal and Eran Elinav

The Role of the Changing Human Microbiome in the Asthma Pandemic

Timothy C. Borbet, MSc, Xiaozhou Zhang, MSc, Anne M€uller, PhD, and Martin J. Blaser, MD

Transmaternal Helicobacter pylori Exposure Reduces Allergic Airway Inflammation in Offspring Through Regulatory T cells

Andreas Kyburz, PhD, Angela Fallegger, MSc, Xiaozhou Zhang, MSc, Aleksandra Altobelli, MSc, Mariela Artola-Boran, MSc, Timothy Borbet, MSc, Sabine Urban, PhD, Petra Paul, PhD, Christian Munz, MD, Stefan Floess, PhD, Jochen Huehn, PhD, Timothy L. Cover, MD, Martin J. Blaser, MD, Christian Taube, MD, and Anne Muller, PhD